Lineage for d1z5lc1 (1z5l C:186-279)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2754035Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2754036Protein automated matches [190740] (31 species)
    not a true protein
  7. 2759478Species Mouse (Mus musculus) [TaxId:10090] [188198] (836 PDB entries)
  8. 2760012Domain d1z5lc1: 1z5l C:186-279 [124483]
    Other proteins in same PDB: d1z5la2, d1z5lb_, d1z5lc2, d1z5ld_
    automated match to d1onqa1
    complexed with nag, pbs, r16

Details for d1z5lc1

PDB Entry: 1z5l (more details), 2.2 Å

PDB Description: structure of a highly potent short-chain galactosyl ceramide agonist bound to cd1d
PDB Compounds: (C:) T-cell surface glycoprotein CD1d antigen

SCOPe Domain Sequences for d1z5lc1:

Sequence, based on SEQRES records: (download)

>d1z5lc1 b.1.1.0 (C:186-279) automated matches {Mouse (Mus musculus) [TaxId: 10090]}

Sequence, based on observed residues (ATOM records): (download)

>d1z5lc1 b.1.1.0 (C:186-279) automated matches {Mouse (Mus musculus) [TaxId: 10090]}

SCOPe Domain Coordinates for d1z5lc1:

Click to download the PDB-style file with coordinates for d1z5lc1.
(The format of our PDB-style files is described here.)

Timeline for d1z5lc1: