Lineage for d1z5lb1 (1z5l B:2-98)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 654118Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (23 proteins)
  6. 654119Protein beta2-microglobulin [88600] (4 species)
  7. 654353Species Mouse (Mus musculus) [TaxId:10090] [88603] (85 PDB entries)
  8. 654422Domain d1z5lb1: 1z5l B:2-98 [124482]
    Other proteins in same PDB: d1z5la1, d1z5la2, d1z5lc1, d1z5lc2
    automatically matched to d1qo3b_
    complexed with nag, pbs, r16

Details for d1z5lb1

PDB Entry: 1z5l (more details), 2.2 Å

PDB Description: Structure of a highly potent short-chain galactosyl ceramide agonist bound to CD1D
PDB Compounds: (B:) Beta-2-microglobulin

SCOP Domain Sequences for d1z5lb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1z5lb1 b.1.1.2 (B:2-98) beta2-microglobulin {Mouse (Mus musculus) [TaxId: 10090]}
qktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdws
fyilahteftptetdtyacrvkhasmaepktvywdrd

SCOP Domain Coordinates for d1z5lb1:

Click to download the PDB-style file with coordinates for d1z5lb1.
(The format of our PDB-style files is described here.)

Timeline for d1z5lb1: