SCOP 1.73: Domain d1z25a1: 1z25 A:2-323

Lineage for d1z25a1 (1z25 A:2-323)

1. Root: SCOP 1.73

2. Class b: All beta proteins [48724] (165 folds)

3. Fold b.34: SH3-like barrel [50036] (18 superfamilies)
   barrel, partly opened; n*=4, S*=8; meander
   the last strand is interrupted by a turn of 3-10 helix

4. Superfamily b.34.14: PAZ domain [101690] (1 family)

5. Family b.34.14.1: PAZ domain [101691] (5 proteins)

6. Protein Argonaute homologue PF0537 [110167] (1 species)
   includes the N-terminal domain

7. Species Pyrococcus furiosus [TaxId:2261] [110168] (3 PDB entries)

8. Domain d1z25a1: 1z25 A:2-323 [124370]
   Other proteins in same PDB: d1z25a2
   automatically matched to d1u04a1
   complexed with mn; mutant

Details for d1z25a1

PDB Entry: 1z25, 2.7 Å

PDB Description: structure of p.furiosus argonaute with bound mn2+

PDB Compounds: (A:) Argonaute

SCOP Domain Sequences for d1z25a1:

Sequence, based on SEQRES records:

>d1z25a1 b.34.14.1 (A:2-323) Argonaute homologue PF0537 {Pyrococcus furiosus [TaxId: 2261]}
kaivvinlvkinkkiipdkiyvyrlfndpeeelqkegysiyrlayenvgividpenliia
ttkeleyegefipegeisfselrndyqsklvlrllkengigeyelskllrkfrkpktfgd
ykvipsvemsvikhdedfylvihiihqiqsmktlwelvnkdpkeleeflmthkenlmlkd
iasplktvykpcfeeytkkpkldhnqeivkywynyhierywntpeaklefyrkfgqvdlk
qpailakfaskikknknykiyllpqlvvptynaeqlesdvakeileytklmpeerkelle
nilaevdsdiidkslseievek

Sequence, based on observed residues (ATOM records):

>d1z25a1 b.34.14.1 (A:2-323) Argonaute homologue PF0537 {Pyrococcus furiosus [TaxId: 2261]}
kaivvinlvkinkkiipdkiyvyrlysiyrlayenvgividpenliiattkeleyegefi
pegeisfselrndyqsklvlrllkengigeyelskllrkfrkpktfgdykvipsvemsvi
khdedfylvihiihqiqsmktlwelvnkdpkeleeflmthkenlmlkdiasplktvykpc
feeytkkpkldhnqeivkywynyhierywntpeaklefyrkfgqvdlkqpailakfaskn
ykiyllpqlvvptynaeqlakeileytklmpeerkellenilaevdsdiidkslseieve
k

Timeline for d1z25a1:

• d1z25a1 is new in SCOP 1.73
  
• d1z25a1 appears in SCOP 1.75
  
• d1z25a1 appears in the current release, SCOPe 2.08