SCOPe 2.08: Domain d1z1ca1: 1z1c A:39-587

Lineage for d1z1ca1 (1z1c A:39-587)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.5: ssDNA viruses [88645] (4 families)

5. Family b.121.5.2: Parvoviridae-like VP [88646] (3 proteins)
   automatically mapped to Pfam PF00740

6. Protein Parvovirus (panleukopenia virus) capsid protein [49661] (6 species)

7. Species Murine minute virus, strain i [TaxId:10794] [49665] (2 PDB entries)

8. Domain d1z1ca1: 1z1c A:39-587 [124350]
   automatically matched to d1mvma_
   protein/DNA complex; complexed with ca, d5m

Details for d1z1ca1

PDB Entry: 1z1c, 3.5 Å

PDB Description: structural determinants of tissue tropism and in vivo pathogenicity for the parvovirus minute virus of mice

PDB Compounds: (A:) coat protein vp2

SCOPe Domain Sequences for d1z1ca1:

Sequence; same for both SEQRES and ATOM records:

>d1z1ca1 b.121.5.2 (A:39-587) Parvovirus (panleukopenia virus) capsid protein {Murine minute virus, strain i [TaxId: 10794]}
gvgvstgsydnqthyrflgdgwveitalatrlvhlnmpksenycrirvhnttdtsvkgnm
akddaheqiwtpwslvdanawgvwlqpsdwqyicntmsqlnlvsldqeifnvvlktvteq
dsggqaikiynndltacmmvavdsnnilpytpaansmetlgfypwkptiaspyryyfcvd
rdlsvtyenqegtiehnvmgtpkgmnsqfftientqqitllrtgdefatgtyyfdtnpvk
lthtwqtnrqlgqppllstfpeadtdagtltaqgsrhgatqmevnwvseairtrpaqvgf
cqphndfeasragpfaapkvpadvtqgmdreangsvrysygkqhgenwaahgpaperytw
detnfgsgrdtrdgfiqsaplvvppplngiltnanpigtkndihfsnvfnsygplttfsh
pspvypqgqiwdkeldlehkprlhitapfvcknnapgqmlvrlgpnltdqydpngatlsr
ivtygtffwkgkltmraklranttwnpvyqvsvedngnsymsvtkwlptatgnmqsvpli
trpvarnty

Timeline for d1z1ca1:

• d1z1ca1 first appeared in SCOP 1.73
  
• d1z1ca1 appears in SCOPe 2.07