SCOP 1.75: Domain d1yzka1: 1yzk A:8-173

Lineage for d1yzka1 (1yzk A:8-173)

1. Root: SCOP 1.75

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (24 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.8: G proteins [52592] (78 proteins)
   core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest

6. Protein Rab11a [102362] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [102363] (9 PDB entries)

8. Domain d1yzka1: 1yzk A:8-173 [124281]
   automatically matched to d1oiva_
   complexed with gnp, mg

Details for d1yzka1

PDB Entry: 1yzk, 2 Å

PDB Description: gppnhp bound rab11 gtpase

PDB Compounds: (A:) Ras-related protein Rab-11A

SCOP Domain Sequences for d1yzka1:

Sequence; same for both SEQRES and ATOM records:

>d1yzka1 c.37.1.8 (A:8-173) Rab11a {Human (Homo sapiens) [TaxId: 9606]}
ydylfkvvligdsgvgksnllsrftrnefnleskstigvefatrsiqvdgktikaqiwdt
agqeryraitsayyrgavgallvydiakhltyenverwlkelrdhadsnivimlvgnksd
lrhlravptdearafaeknglsfietsaldstnveaafqtilteiy

Timeline for d1yzka1:

• d1yzka1 first appeared in SCOP 1.73
  
• d1yzka1 is called d1yzka_ in SCOPe 2.01
  
• d1yzka1 appears in the current release, SCOPe 2.08, called d1yzka_