SCOPe 2.03: Domain d1yyfb1: 1yyf B:2-443

Lineage for d1yyfb1 (1yyf B:2-443)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.20: Extended AAA-ATPase domain [81269] (29 proteins)
   fold is similar to that of RecA, but lacks the last two strands, followed by a family-specific Arg-finger domain

6. Protein HslU [52721] (2 species)
   ATPase subunit of ATP-dependent protease

7. Species Escherichia coli [TaxId:562] [52722] (9 PDB entries)

8. Domain d1yyfb1: 1yyf B:2-443 [124216]
   Other proteins in same PDB: d1yyfc1, d1yyfd1
   automatically matched to d1e94e_
   complexed with adp

Details for d1yyfb1

PDB Entry: 1yyf, 4.16 Å

PDB Description: Correction of X-ray Intensities from an HslV-HslU co-crystal containing lattice translocation defects

PDB Compounds: (B:) ATP-dependent hsl protease ATP-binding subunit hslu

SCOPe Domain Sequences for d1yyfb1:

Sequence, based on SEQRES records:

>d1yyfb1 c.37.1.20 (B:2-443) HslU {Escherichia coli [TaxId: 562]}
semtpreivseldkhiigqdnakrsvaialrnrwrrmqlneelrhevtpknilmigptgv
gkteiarrlaklanapfikveatkftevgyvgkevdsiirdltdaavkmvrvqaieknry
raeelaeerildvlippaknnwgqteqqqepsaarqafrkklregqlddkeieidlaaap
mgveimappgmeemtsqlqsmfqnlggqkqkarklkikdamkllieeeaaklvnpeelkq
daidaveqhgivfideidkickrgessgpdvsregvqrdllplvegctvstkhgmvktdh
ilfiasgafqiakpsdlipelqgrlpirvelqalttsdferiltepnasitvqykalmat
egvnieftdsgikriaeaawqvnestenigarrlhtvlerlmeeisydasdlsgqnitid
adyvskhldalvadedlsrfil

Sequence, based on observed residues (ATOM records):

>d1yyfb1 c.37.1.20 (B:2-443) HslU {Escherichia coli [TaxId: 562]}
semtpreivseldkhiigqdnakrsvaialrnrwrrmqlneelrhevtpknilmigptgv
gkteiarrlaklanapfikveatkftevgyvgkevdsiirdltdaavkmvrvqaieknry
raeelaeerildvlippaknnwgqteqqqepsaarqafrkklregqlddkeiekqkarkl
kikdamkllieeeaaklvnpeelkqdaidaveqhgivfideidkickrgessgpdvsreg
vqrdllplvegctvstkhgmvktdhilfiasgafqiakpsdlipelqgrlpirvelqalt
tsdferiltepnasitvqykalmategvnieftdsgikriaeaawqvnestenigarrlh
tvlerlmeeisydasdlsgqnitidadyvskhldalvadedlsrfil

Timeline for d1yyfb1:

• d1yyfb1 first appeared in SCOP 1.73
  
• d1yyfb1 appears in SCOPe 2.02
  
• d1yyfb1 appears in SCOPe 2.04
  
• d1yyfb1 appears in the current release, SCOPe 2.08