SCOPe 2.07: Domain d1yyda_: 1yyd A:

Lineage for d1yyda_ (1yyd A:)

1. Root: SCOPe 2.07

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.93: Heme-dependent peroxidases [48112] (1 superfamily)
   multihelical; consists of two all-alpha domains

4. Superfamily a.93.1: Heme-dependent peroxidases [48113] (4 families)

5. Family a.93.1.1: CCP-like [48114] (5 proteins)

6. Protein automated matches [190089] (9 species)
   not a true protein

7. Species Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId:5306] [186892] (6 PDB entries)

8. Domain d1yyda_: 1yyd A: [124212]
   automated match to d1mn1__
   complexed with ca, gol, hem, man, mn, nag, so4

Details for d1yyda_

PDB Entry: 1yyd, 1.45 Å

PDB Description: high resolution crystal structure of manganese peroxidase

PDB Compounds: (A:) Peroxidase manganese-dependent I

SCOPe Domain Sequences for d1yyda_:

Sequence; same for both SEQRES and ATOM records:

>d1yyda_ a.93.1.1 (A:) automated matches {Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]}
avcpdgtrvshaaccafiplaqdlqetifqnecgedahevirltfhdaiaisrsqgpkag
ggadgsmllfptvepnfsanngiddsvnnlipfmqkhntisaadlvqfagavalsncpga
prleflagrpnktiaavdglipepqdsvtkilqrfedaggftpfevvsllashsvaradk
vdqtidaapfdstpftfdtqvflevllkgvgfpgsanntgevasplplgsgsdtgemrlq
sdfalahdprtaciwqgfvneqafmaasfraamsklavlghnrnslidcsdvvpvpkpat
gqpamfpastgpqdlelscpserfptlttqpgasqsliahcpdgsmscpgvqfngpa

Timeline for d1yyda_:

• d1yyda_ first appeared in SCOP 1.73, called d1yyda1
  
• d1yyda_ appears in SCOPe 2.06
  
• d1yyda_ appears in the current release, SCOPe 2.08