SCOPe 2.08: Domain d1yw6b_: 1yw6 B:

Lineage for d1yw6b_ (1yw6 B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
   core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops

4. Superfamily c.56.5: Zn-dependent exopeptidases [53187] (10 families)
   core: mixed beta-sheet of 8 strands, order 12435867; strands 2, 6 & 7 are antiparallel to the rest

5. Family c.56.5.7: AstE/AspA-like [142526] (3 proteins)
   Pfam PF04952; Succinylglutamate desuccinylase / Aspartoacylase family; contains extra C-terminal domain, new variant of the Barrel-sandwich hybrid fold (51229)

6. Protein Succinylglutamate desuccinylase AstE [142527] (4 species)

7. Species Escherichia coli [TaxId:562] [142530] (1 PDB entry)
   Uniprot P76215 1-322

8. Domain d1yw6b_: 1yw6 B: [124133]
   Other proteins in same PDB: d1yw6a2
   automated match to d1yw6a1
   complexed with so4

Details for d1yw6b_

PDB Entry: 1yw6, 3.1 Å

PDB Description: Crystal Structure of Succinylglutamate Desuccinylase from Escherichia coli, Northeast Structural Genomics Target ET72.

PDB Compounds: (B:) Succinylglutamate desuccinylase

SCOPe Domain Sequences for d1yw6b_:

Sequence, based on SEQRES records:

>d1yw6b_ c.56.5.7 (B:) Succinylglutamate desuccinylase AstE {Escherichia coli [TaxId: 562]}
mdnflaltltgkkpvitereingvrwrwlgdgvleltpltppqgalvisagihgnetapv
emldallgaishgeiplrwrllvilgnppalkqgkrychsdmnrmfggrwqlfaesgetc
rareleqcledfydqgkesvrwhldlhtairgslhpqfgvlpqrdipwdekfltwlgaag
lealvfhqepggtfthfsarhfgalactlelgkalpfgqndlrqfavtasaiaallsges
vgivrtpplryrvvsqitrhspsfemhmasdtlnfmpfekgtllaqdgeerftvthdvey
vlfpnplvalglraglmlekis

Sequence, based on observed residues (ATOM records):

>d1yw6b_ c.56.5.7 (B:) Succinylglutamate desuccinylase AstE {Escherichia coli [TaxId: 562]}
mdnflaltltgkkpvitereingvrwrwlgdgvleltpltppqgalvisagihgnetapv
emldallgaishgeiplrwrllvilgnppalkqgkrychsdmnrmfggrwqlfaesgetc
rareleqcledfydqgkesvrwhldlhtairgslhpqfgvlpqpwdekfltwlgaaglea
lvfhpggtfthfsarhfgalactlellrqfavtasaiaallsgivrtpplryrvvsqitr
hspsfemhmasdtlnfmpfekgtllaqdgeerftvthdveyvlfpnplvalglraglmle
kis

Timeline for d1yw6b_:

• d1yw6b_ first appeared in SCOP 1.73, called d1yw6b1
  
• d1yw6b_ appears in SCOPe 2.07