SCOPe 2.08: Domain d1yw4a1: 1yw4 A:2-332

Lineage for d1yw4a1 (1yw4 A:2-332)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
   core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops

4. Superfamily c.56.5: Zn-dependent exopeptidases [53187] (10 families)
   core: mixed beta-sheet of 8 strands, order 12435867; strands 2, 6 & 7 are antiparallel to the rest

5. Family c.56.5.7: AstE/AspA-like [142526] (3 proteins)
   Pfam PF04952; Succinylglutamate desuccinylase / Aspartoacylase family; contains extra C-terminal domain, new variant of the Barrel-sandwich hybrid fold (51229)

6. Protein Succinylglutamate desuccinylase AstE [142527] (4 species)

7. Species Chromobacterium violaceum [TaxId:536] [142531] (1 PDB entry)
   Uniprot Q7NU26 2-332

8. Domain d1yw4a1: 1yw4 A:2-332 [124131]
   complexed with zn

Details for d1yw4a1

PDB Entry: 1yw4, 2 Å

PDB Description: crystal structure of the succinylglutamate desuccinylase from chromobacterium violaceum, northeast structural genomics target cvr22.

PDB Compounds: (A:) Succinylglutamate desuccinylase

SCOPe Domain Sequences for d1yw4a1:

Sequence, based on SEQRES records:

>d1yw4a1 c.56.5.7 (A:2-332) Succinylglutamate desuccinylase AstE {Chromobacterium violaceum [TaxId: 536]}
thspsflqhalsssdtraewplpgglaarwlapgcvelngdargadsvllscgvhgneta
pievvdgmltdiaagqlalncrllvmfanldairqgvrygnydmnrlfngaharhpelpe
svraaeletlaaeffagararklhydlhtairgsvfekfaiypflhdgrthkreqlawlq
rcgieavllhtqpantfsyftsqyceadaftlelgkarpfgqndlsrfsgidgalrglls
npqanvpdldedklplfrakydlvkhseafklnladsvenftllpdgmliaedgavryqa
tggeerilfpnpavkpglragivveparlps

Sequence, based on observed residues (ATOM records):

>d1yw4a1 c.56.5.7 (A:2-332) Succinylglutamate desuccinylase AstE {Chromobacterium violaceum [TaxId: 536]}
thspsflqhalsssdtraewplpgglaarwlapgcvelngdargadsvllscgvhgneta
pievvdgmltdiaagqlalncrllvmfanldairqgvrygnydmnrlfngaharhpelpe
svraaeletlaaeffagararklhydlhtairgsvfekfaiypflhrthkreqlawlqrc
gieavllhtqpantfsyftsqyceadaftlelgkarpfgqndlsrfsgidgalrgllsnp
qanvpdldedklplfrakydlvkhsfklnladsvenftllpdgmliaatggeerilfpnp
avkpglragivveparlps

Timeline for d1yw4a1:

• d1yw4a1 first appeared in SCOP 1.73
  
• d1yw4a1 appears in SCOPe 2.07