SCOPe 2.08: Domain d1yw1a_: 1yw1 A:

Lineage for d1yw1a_ (1yw1 A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.16: Bacterial luciferase-like [51679] (5 families)
   consists of clearly related families of somewhat different folds

5. Family c.1.16.4: Ssud-like monoxygenases [82275] (3 proteins)

6. Protein Putative monooxygenase YtnJ [110380] (1 species)

7. Species Bacillus subtilis [TaxId:1423] [110381] (2 PDB entries)
   Uniprot O34974

8. Domain d1yw1a_: 1yw1 A: [124130]
   automated match to d1tvla_
   complexed with fmn, glc

Details for d1yw1a_

PDB Entry: 1yw1, 2.81 Å

PDB Description: structure of ytnj from bacillus subtilis in complex with fmn

PDB Compounds: (A:) protein YTNJ

SCOPe Domain Sequences for d1yw1a_:

Sequence, based on SEQRES records:

>d1yw1a_ c.1.16.4 (A:) Putative monooxygenase YtnJ {Bacillus subtilis [TaxId: 1423]}
radfiqfgamihgvggttdgwrhpdvdpsastniefymkkaqtaekglfsfifiadglfi
seksiphflnrfepitilsalasvtkniglvgtfstsftepftisrqlmsldhisggrag
wnlvtspqegaarnhsksnlpehteryeiaqehldvvrglwnswehdafihnkktgqffd
qaklhrlnhkgkyfqvegplnigrskqgepvvfqagssetgrqfaaknadaifthsnsle
etkafyadvksraadegrdpssvrifpgispivadteeeaekkyrefaelipienavtyl
arffddydlsvypldepfpdigdvgknafqsttdrikreakarnltlrevaqemafprtl
figtpervaslietwfnaeaadgfivgsdipgtldafvekvipilqerglyrqdyrggtl
renlglgip

Sequence, based on observed residues (ATOM records):

>d1yw1a_ c.1.16.4 (A:) Putative monooxygenase YtnJ {Bacillus subtilis [TaxId: 1423]}
radfiqfgamihgvggttdgwrhpdvdpsastniefymkkaqtaekglfsfifiadglfi
seksiphflnrfepitilsalasvtkniglvgtfstsftepftisrqlmsldhisggrag
wnlvtspqegaarnhsksnlpehteryeiaqehldvvrglwnswehdafihnkktgqffd
qaklhrlnhkgkyfqvegplnigrskqgepvvfqagssetgrqfaaknadaifthsnsle
etkafyadvksraadegrdpssvrifpgispivadteeeaekkyrefaelipienavtyl
areakarnltlrevaqemafprtlfigtpervaslietwfnaeaadgfivgsdipgtlda
fvekvipilqerglyrqdyrggtlrenlglgip

Timeline for d1yw1a_:

• d1yw1a_ first appeared in SCOP 1.73, called d1yw1a1
  
• d1yw1a_ appears in SCOPe 2.07