Lineage for d1yvia1 (1yvi A:2-143)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1987359Fold a.24: Four-helical up-and-down bundle [47161] (28 superfamilies)
    core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
  4. 1987880Superfamily a.24.10: Histidine-containing phosphotransfer domain, HPT domain [47226] (7 families) (S)
    contains additional, fifth helix at the N-terminus
  5. 1987888Family a.24.10.2: Phosphorelay protein-like [47230] (3 protein domains)
  6. 1987889Protein Histidine-containing phosphotransfer protein HP1 [140413] (1 species)
  7. 1987890Species Rice (Oryza sativa) [TaxId:4530] [140414] (2 PDB entries)
    Uniprot Q6VAK4 2-143
  8. 1987893Domain d1yvia1: 1yvi A:2-143 [124099]
    Other proteins in same PDB: d1yvia2

Details for d1yvia1

PDB Entry: 1yvi (more details), 2 Å

PDB Description: x-ray structure of putative histidine-containing phosphotransfer protein from rice, ak104879
PDB Compounds: (A:) histidine-containing phosphotransfer protein

SCOPe Domain Sequences for d1yvia1:

Sequence, based on SEQRES records: (download)

>d1yvia1 a.24.10.2 (A:2-143) Histidine-containing phosphotransfer protein HP1 {Rice (Oryza sativa) [TaxId: 4530]}
aaaalrdqltallssmfsqglvdeqfqqlqmlqdeggtpgfvsevvtlfcddadriinei
atlleqpvvnfdkvdayvhqlkgssasvgaqkvkftcmqfrqfcqdksrdgclmalavvr
ndfydlrnkfqtmlqleqqiqa

Sequence, based on observed residues (ATOM records): (download)

>d1yvia1 a.24.10.2 (A:2-143) Histidine-containing phosphotransfer protein HP1 {Rice (Oryza sativa) [TaxId: 4530]}
aaaalrdqltallssmfsqglvdeqfqqlqmlqdtpgfvsevvtlfcddadriineiatl
leqpvvnfdkvdayvhqlkgssasvgaqkvkftcmqfrqfcqdksrdgclmalavvrndf
ydlrnkfqtmlqleqqiqa

SCOPe Domain Coordinates for d1yvia1:

Click to download the PDB-style file with coordinates for d1yvia1.
(The format of our PDB-style files is described here.)

Timeline for d1yvia1:

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Domains from same chain:
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d1yvia2
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Domains from other chains:
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d1yvib_