SCOPe 2.06: Domain d1yv1b2: 1yv1 B:167-202

Lineage for d1yv1b2 (1yv1 B:167-202)

1. Root: SCOPe 2.06

2. Class g: Small proteins [56992] (94 folds)

3. Fold g.41: Rubredoxin-like [57769] (17 superfamilies)
   metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2

4. Superfamily g.41.5: Rubredoxin-like [57802] (4 families)

5. Family g.41.5.1: Rubredoxin [57803] (5 proteins)

6. Protein Nigerythrin, C-terminal domain [144194] (1 species)

7. Species Desulfovibrio vulgaris [TaxId:881] [144195] (3 PDB entries)
   Uniprot P30820 167-202

8. Domain d1yv1b2: 1yv1 B:167-202 [124087]
   Other proteins in same PDB: d1yv1a1, d1yv1b1
   automated match to d1yuxa2
   complexed with fe2

Details for d1yv1b2

PDB Entry: 1yv1, 1.5 Å

PDB Description: Fully reduced state of nigerythrin (all ferrous)

PDB Compounds: (B:) Nigerythrin

SCOPe Domain Sequences for d1yv1b2:

Sequence; same for both SEQRES and ATOM records:

>d1yv1b2 g.41.5.1 (B:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
dddkfhlcpicgyihkgedfekcpicfrpkdtftay

Timeline for d1yv1b2:

• d1yv1b2 first appeared in SCOP 1.73
  
• d1yv1b2 appears in SCOPe 2.05
  
• d1yv1b2 appears in SCOPe 2.07
  
• d1yv1b2 appears in the current release, SCOPe 2.08