Structural Classification of Proteins and ASTRAL release 1.75 (June 2009)
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Lineage for d1yuza2 (1yuz A:167-202)

  1. Root: SCOP 1.75
  2. Class g: Small proteins [56992] (90 folds)
  3. Fold g.41: Rubredoxin-like [57769] (17 superfamilies)
    metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
  4. Superfamily g.41.5: Rubredoxin-like [57802] (3 families) (S)
  5. Family g.41.5.1: Rubredoxin [57803] (4 protein domains)
  6. Protein Nigerythrin, C-terminal domain [144194] (1 species)
  7. Species Desulfovibrio vulgaris [TaxId:881] [144195] (3 PDB entries)
    Uniprot P30820 167-202
  8. Domain d1yuza2: 1yuz A:167-202 [124078]
    Other proteins in same PDB: d1yuza1, d1yuzb1
    complexed with fe, fe2

Details for d1yuza2

PDB Entry: 1yuz (more details)
PDB Description: partially reduced state of nigerythrin
PDB Compounds: (A:) Nigerythrin

SCOP Domain Sequences for d1yuza2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
dddkfhlcpicgyihkgedfekcpicfrpkdtftay

SCOP Domain Coordinates for d1yuza2:

Click to download the PDB-style file with coordinates for d1yuza2.
(The format of our PDB-style files is described here.)

Timeline for d1yuza2:

d1yuza2 appears in SCOP 1.73
d1yuza2 appears in SCOP 1.75A


d1yuza2
(click for larger image)


d1yuza2 in context of chain
Domains from same chain:
d1yuza1


d1yuza2 in context of PDB
Domains from other chains:
d1yuzb1, d1yuzb2

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