SCOP 1.73: Domain d1yuxa1: 1yux A:1-166

Lineage for d1yuxa1 (1yux A:1-166)

1. Root: SCOP 1.73

2. Class a: All alpha proteins [46456] (258 folds)

3. Fold a.25: Ferritin-like [47239] (4 superfamilies)
   core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection

4. Superfamily a.25.1: Ferritin-like [47240] (5 families)
   contains bimetal-ion centre in the middle of the bundle

5. Family a.25.1.1: Ferritin [47241] (9 proteins)

6. Protein Nigerythrin, N-terminal domain [140440] (1 species)

7. Species Desulfovibrio vulgaris [TaxId:881] [140441] (3 PDB entries)

8. Domain d1yuxa1: 1yux A:1-166 [124073]
   Other proteins in same PDB: d1yuxa2, d1yuxb2
   complexed with fe, fe2; mutant

Details for d1yuxa1

PDB Entry: 1yux, 1.6 Å

PDB Description: Mixed valant state of nigerythrin

PDB Compounds: (A:) Nigerythrin

SCOP Domain Sequences for d1yuxa1:

Sequence, based on SEQRES records:

>d1yuxa1 a.25.1.1 (A:1-166) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
mkvraqvptvknatnfnmvadsktsvgstlenlkaaiagetgahakytafakaareqgye
qiarlfeataaaelihigleyalvaemepgyekptvaapsayscdlnlisgangeiyets
dmypafirkaqeegnskavhvftraklaesvhaerylaayndidap

Sequence, based on observed residues (ATOM records):

>d1yuxa1 a.25.1.1 (A:1-166) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
mkvraqvptvknatnfnmvadsktsvgstlenlkaaiagetgahakytafakaareqgye
qiarlfeataaaelihigleyalvaemepgyekptvpsayscdlnlisgangeiyetsdm
ypafirkaqeegnskavhvftraklaesvhaerylaayndidap

Timeline for d1yuxa1:

• d1yuxa1 is new in SCOP 1.73
  
• d1yuxa1 appears in SCOP 1.75
  
• d1yuxa1 appears in the current release, SCOPe 2.08