Lineage for d1yuxa1 (1yux A:1-166)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1988413Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 1988414Superfamily a.25.1: Ferritin-like [47240] (10 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 1988415Family a.25.1.1: Ferritin [47241] (10 protein domains)
  6. 1989235Protein Nigerythrin, N-terminal domain [140440] (1 species)
  7. 1989236Species Desulfovibrio vulgaris [TaxId:881] [140441] (3 PDB entries)
    Uniprot P30820 1-166
  8. 1989241Domain d1yuxa1: 1yux A:1-166 [124073]
    Other proteins in same PDB: d1yuxa2, d1yuxb2
    complexed with fe, fe2

Details for d1yuxa1

PDB Entry: 1yux (more details), 1.6 Å

PDB Description: Mixed valant state of nigerythrin
PDB Compounds: (A:) Nigerythrin

SCOPe Domain Sequences for d1yuxa1:

Sequence, based on SEQRES records: (download)

>d1yuxa1 a.25.1.1 (A:1-166) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
mkvraqvptvknatnfnmvadsktsvgstlenlkaaiagetgahakytafakaareqgye
qiarlfeataaaelihigleyalvaemepgyekptvaapsayscdlnlisgangeiyets
dmypafirkaqeegnskavhvftraklaesvhaerylaayndidap

Sequence, based on observed residues (ATOM records): (download)

>d1yuxa1 a.25.1.1 (A:1-166) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
mkvraqvptvknatnfnmvadsktsvgstlenlkaaiagetgahakytafakaareqgye
qiarlfeataaaelihigleyalvaemepgyekptvpsayscdlnlisgangeiyetsdm
ypafirkaqeegnskavhvftraklaesvhaerylaayndidap

SCOPe Domain Coordinates for d1yuxa1:

Click to download the PDB-style file with coordinates for d1yuxa1.
(The format of our PDB-style files is described here.)

Timeline for d1yuxa1:

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Domains from same chain:
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d1yuxa2