Lineage for d1yudb_ (1yud B:)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2423914Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2423915Superfamily b.82.1: RmlC-like cupins [51182] (25 families) (S)
  5. 2424406Family b.82.1.16: YML079-like [117318] (4 proteins)
    Pfam PF06172; DUF985
  6. 2424427Protein automated matches [190840] (1 species)
    not a true protein
  7. 2424428Species Shewanella oneidensis [TaxId:211586] [188155] (1 PDB entry)
  8. 2424429Domain d1yudb_: 1yud B: [124047]
    Other proteins in same PDB: d1yuda1
    automated match to d1yuda1

Details for d1yudb_

PDB Entry: 1yud (more details), 2.7 Å

PDB Description: X-ray Crystal Structure of Protein SO0799 from Shewanella oneidensis. Northeast Structural Genomics Consortium Target SoR12.
PDB Compounds: (B:) hypothetical protein SO0799

SCOPe Domain Sequences for d1yudb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yudb_ b.82.1.16 (B:) automated matches {Shewanella oneidensis [TaxId: 211586]}
mqnaddfikfleleqhveggfyrssyrsetafdpsrqlwssiyfllrtgevshfhrltad
emwyfhagqsltiymispegelttaqlgldlaagerpqflvpkgcifgsamnqdgfslvg
cmvspgftfddfelfsqeallamypqhkavvqklsrpe

SCOPe Domain Coordinates for d1yudb_:

Click to download the PDB-style file with coordinates for d1yudb_.
(The format of our PDB-style files is described here.)

Timeline for d1yudb_: