Lineage for d1yu9a1 (1yu9 A:2-172)

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families) (S)
    division into families based on beta-sheet topologies
  5. Family c.37.1.8: G proteins [52592] (81 proteins)
    core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
  6. Protein Rab4a [142247] (1 species)
  7. Species Human (Homo sapiens) [TaxId:9606] [142248] (3 PDB entries)
    Uniprot P20338 2-172! Uniprot P20338 4-172! Uniprot P20338 4-184
  8. Domain d1yu9a1: 1yu9 A:2-172 [124045]
    Other proteins in same PDB: d1yu9a2
    complexed with gnp, mg, so4

Details for d1yu9a1

PDB Entry: 1yu9 (more details), 2.07 Å

PDB Description: GppNHp-Bound Rab4A
PDB Compounds: (A:) GTP-binding protein

SCOPe Domain Sequences for d1yu9a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yu9a1 c.37.1.8 (A:2-172) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
setydflfkflvignagtgkscllhqfiekkfkddsnhtigvefgskiinvggkyvklqi
wdtagqerfrsvtrsyyrgaagallvyditsretynaltnwltdarmlasqniviilcgn
kkdldadrevtfleasrfaqenelmfletsaltgedveeafvqcarkilnk

SCOPe Domain Coordinates for d1yu9a1 are not available.

Timeline for d1yu9a1:

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Domains from same chain:
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d1yu9a2