SCOPe 2.08: Domain d1yrra2: 1yrr A:54-350

Lineage for d1yrra2 (1yrr A:54-350)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families)
   the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
   has transition metal ions bound inside the barrel

5. Family c.1.9.10: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain [82261] (1 protein)
   automatically mapped to Pfam PF01979

6. Protein N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain [82262] (3 species)

7. Species Escherichia coli [TaxId:562] [141808] (4 PDB entries)
   Uniprot P0AF18 54-350

8. Domain d1yrra2: 1yrr A:54-350 [123936]
   Other proteins in same PDB: d1yrra1, d1yrrb1
   automated match to d1ymya2
   complexed with gol, po4

Details for d1yrra2

PDB Entry: 1yrr, 2 Å

PDB Description: Crystal Structure Of The N-Acetylglucosamine-6-Phosphate Deacetylase From Escherichia Coli K12 at 2.0 A Resolution

PDB Compounds: (A:) N-acetylglucosamine-6-phosphate deacetylase

SCOPe Domain Sequences for d1yrra2:

Sequence, based on SEQRES records:

>d1yrra2 c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Escherichia coli [TaxId: 562]}
gfidvqlngcggvqfndtaeavsvetleimqkaneksgctnylptlittsdelmkqgvrv
mreylakhpnqalglhlegpwlnlvkkgthnpnfvrkpdaalvdflcenadvitkvtlap
emvpaevisklanagivvsaghsnatlkeakagfragitfathlynampyitgrepglag
aildeadiycgiiadglhvdyanirnakrlkgdklclvtdatapaganieqfifagktiy
yrnglcvdengtlsgssltmiegvrnlvehcgialdevlrmatlyparaigvekrlg

Sequence, based on observed residues (ATOM records):

>d1yrra2 c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Escherichia coli [TaxId: 562]}
gfidvqlngcggvqfndtaeavsvetleimqkaneksgctnylptlittsdelmkqgvrv
mreylakhpnqalglhlegpwlnlvkkthnpnfvrkpdaalvdflcenadvitkvtlape
mvpaevisklanagivvsaghsnatlkeakagfragitfathlynampyitgrepglaga
ildeadiycgiiadglhvdyanirnakrlkgdklclvtdatapaganieqfifagktiyy
rnglcvdengtlsgssltmiegvrnlvehcgialdevlrmatlyparaigvekrlg

Timeline for d1yrra2:

• d1yrra2 first appeared in SCOP 1.73
  
• d1yrra2 appears in SCOPe 2.07