Lineage for d1yrbb2 (1yrb B:1-246)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2111791Family c.37.1.10: Nitrogenase iron protein-like [52652] (16 protein domains)
    core: parallel beta-sheet of 7 strands; order 3241567
  6. 2111856Protein ATP(GTP)-binding protein PAB0955 [142297] (1 species)
    PYRAB14380; belongs to Pfam PF03029
  7. 2111857Species Pyrococcus abyssi [TaxId:29292] [142298] (7 PDB entries)
    Uniprot Q9UYR9 30-273
  8. 2111859Domain d1yrbb2: 1yrb B:1-246 [123916]
    Other proteins in same PDB: d1yrba3, d1yrbb3
    automated match to d1yr6a1
    complexed with gdp, mg

Details for d1yrbb2

PDB Entry: 1yrb (more details), 1.75 Å

PDB Description: pab0955 crystal structure : a gtpase in gdp and mg bound form from pyrococcus abyssi
PDB Compounds: (B:) ATP(GTP)binding protein

SCOPe Domain Sequences for d1yrbb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yrbb2 c.37.1.10 (B:1-246) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}

SCOPe Domain Coordinates for d1yrbb2:

Click to download the PDB-style file with coordinates for d1yrbb2.
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Timeline for d1yrbb2:

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Domains from same chain:
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