Lineage for d1yrab_ (1yra B:)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1845072Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 1845073Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families) (S)
    division into families based on beta-sheet topologies
  5. 1847600Family c.37.1.10: Nitrogenase iron protein-like [52652] (16 proteins)
    core: parallel beta-sheet of 7 strands; order 3241567
  6. 1847665Protein ATP(GTP)-binding protein PAB0955 [142297] (1 species)
    PYRAB14380; belongs to Pfam PF03029
  7. 1847666Species Pyrococcus abyssi [TaxId:29292] [142298] (7 PDB entries)
    Uniprot Q9UYR9 30-273
  8. 1847671Domain d1yrab_: 1yra B: [123914]
    automated match to d1yr6a1
    complexed with gdp

Details for d1yrab_

PDB Entry: 1yra (more details), 2.3 Å

PDB Description: pab0955 crystal structure : a gtpase in gdp bound form from pyrococcus abyssi
PDB Compounds: (B:) ATP(GTP)binding protein

SCOPe Domain Sequences for d1yrab_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yrab_ c.37.1.10 (B:) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
mrgshhhhhhgmasmivvfvgtagsgkttltgefgrylednykvayvnldtgvkelpyep
sidvrefvtveeimregygpngaivesydrlmekfneylnkilrlekendyvlidtpgqm
etflfhefgvrlmenlpyplvvyisdpeilkkpndycfvrffallidlrlgattipalnk
vdllseeekerhrkyfedidyltarlkldpsmqglmaykmcsmmtevlppvrvlylsakt
regfedletlayehyctcgdl

SCOPe Domain Coordinates for d1yrab_:

Click to download the PDB-style file with coordinates for d1yrab_.
(The format of our PDB-style files is described here.)

Timeline for d1yrab_: