SCOPe 2.08: Domain d1yqra2: 1yqr A:12-135

Lineage for d1yqra2 (1yqr A:12-135)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.129: TBP-like [55944] (11 superfamilies)
   beta-alpha-beta(4)-alpha

4. Superfamily d.129.1: TATA-box binding protein-like [55945] (3 families)

5. Family d.129.1.2: DNA repair glycosylase, N-terminal domain [55952] (3 proteins)
   contains a single copy of this fold

6. Protein 8-oxoguanine glycosylase [55955] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [55956] (24 PDB entries)

8. Domain d1yqra2: 1yqr A:12-135 [123898]
   Other proteins in same PDB: d1yqra1, d1yqra3
   automated match to d2noia1
   protein/DNA complex; complexed with ca

Details for d1yqra2

PDB Entry: 1yqr, 2.43 Å

PDB Description: catalytically inactive human 8-oxoguanine glycosylase crosslinked to oxog containing dna

PDB Compounds: (A:) N-glycosylase/DNA lyase

SCOPe Domain Sequences for d1yqra2:

Sequence, based on SEQRES records:

>d1yqra2 d.129.1.2 (A:12-135) 8-oxoguanine glycosylase {Human (Homo sapiens) [TaxId: 9606]}
ghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqtee
qlhctvyrgdksqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvr
llrq

Sequence, based on observed residues (ATOM records):

>d1yqra2 d.129.1.2 (A:12-135) 8-oxoguanine glycosylase {Human (Homo sapiens) [TaxId: 9606]}
ghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqtee
qlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllr
q

Timeline for d1yqra2:

• d1yqra2 first appeared in SCOP 1.73
  
• d1yqra2 appears in SCOPe 2.07