SCOPe 2.04: Domain d1yo6a1: 1yo6 A:1-250

Lineage for d1yo6a1 (1yo6 A:1-250)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (71 proteins)
   also known as short-chain dehydrogenases and SDR family
   parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7

6. Protein Putative carbonyl reductase sniffer [141913] (1 species)

7. Species Nematode (Caenorhabditis elegans) [TaxId:6239] [141914] (1 PDB entry)
   Uniprot P90780 1-250

8. Domain d1yo6a1: 1yo6 A:1-250 [123769]
   Other proteins in same PDB: d1yo6b_, d1yo6c_, d1yo6d_, d1yo6e_, d1yo6f_

Details for d1yo6a1

PDB Entry: 1yo6, 2.6 Å

PDB Description: Crystal Structure of the putative Carbonyl Reductase Sniffer of Caenorhabditis elegans

PDB Compounds: (A:) Putative Carbonyl Reductase Sniffer

SCOPe Domain Sequences for d1yo6a1:

Sequence, based on SEQRES records:

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
mspgsvvvtganrgiglglvqqlvkdknirhiiatardvekatelksikdsrvhvlpltv
tcdksldtfvskvgeivgsdglsllinnagvllsygtntepnraviaeqldvnttsvvll
tqkllpllknaaskesgdqlsvsraavitissglgsitdntsgsaqfpvlayrmskaain
mfgrtlavdlkddnvlvvnfcpgwvqtnlggknaaltveqstaelissfnkldnshngrf
fmrnlkpyef

Sequence, based on observed residues (ATOM records):

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
mspgsvvvtganrgiglglvqqlvkdknirhiiatardvekatelksikdsrvhvlpltv
tcdksldtfvskvgeivgsdglsllinnagvllsygtntepnraviaeqldvnttsvvll
tqkllpllknaaskesgdqlsvsraavitissglgsitdntsgsaqfpvlayrmskaain
mfgrtlavdlkddnvlvvnfcpgwveqstaelissfnkldnshngrffmrnlkpyef

Timeline for d1yo6a1:

• d1yo6a1 first appeared in SCOP 1.73
  
• d1yo6a1 appears in SCOPe 2.03
  
• d1yo6a1 appears in SCOPe 2.05
  
• d1yo6a1 appears in the current release, SCOPe 2.08