SCOPe 2.08: Domain d1ynua_: 1ynu A:

Lineage for d1ynua_ (1ynu A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.4: GABA-aminotransferase-like [53417] (17 proteins)
   formerly omega-Aminoacid:pyruvate aminotransferase-like

6. Protein 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) [53440] (2 species)

7. Species Apple (Malus domestica) [TaxId:3750] [53441] (5 PDB entries)

8. Domain d1ynua_: 1ynu A: [123762]
   automated match to d1m7ya_
   complexed with k, ni, py4, trs

Details for d1ynua_

PDB Entry: 1ynu, 2.25 Å

PDB Description: Crystal structure of apple ACC synthase in complex with L-vinylglycine

PDB Compounds: (A:) 1-aminocyclopropane-1-carboxylate synthase

SCOPe Domain Sequences for d1ynua_:

Sequence, based on SEQRES records:

>d1ynua_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}
lsrnatfnshgqdssyflgwqeyeknpyhevhntngiiqmglaenqlcfdlleswlaknp
eaaafkkngesifaelalfqdyhglpafkkamvdfmaeirgnkvtfdpnhlvltagatsa
netfifcladpgeavliptpyypgfdrdlkwrtgveivpihctssngfqitetaleeayq
eaekrnlrvkgvlvtnpsnplgttmtrnelylllsfvedkgihlisdeiysgtafsspsf
isvmevlkdrncdensevwqrvhvvyslskdlglpgfrvgaiysnddmvvaaatkmssfg
lvssqtqhllsamlsdkkltknyiaenhkrlkqrqkklvsglqksgisclngnaglfcwv
dmrhllrsntfeaemelwkkivyevhlnispgsschctepgwfrvcfanlpertldlamq
rlkafvgeyy

Sequence, based on observed residues (ATOM records):

>d1ynua_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}
lsrnatssyflgwqeyeknpyhevhntngiiqmglaenqlcfdlleswlaknpeaaafkk
ngesifaelalfqdyhglpafkkamvdfmaeirgnkvtfdpnhlvltagatsanetfifc
ladpgeavliptpyypgfdrdlkwrtgveivpihctssngfqitetaleeayqeaekrnl
rvkgvlvtnpsnplgttmtrnelylllsfvedkgihlisdeiysgtafsspsfisvmevl
kdsevwqrvhvvyslskdlglpgfrvgaiysnddmvvaaatkmssfglvssqtqhllsam
lsdkkltknyiaenhkrlkqrqkklvsglqksgisclngnaglfcwvdmrhllrsntfea
emelwkkivyevhlnispgsschctepgwfrvcfanlpertldlamqrlkafvgeyy

Timeline for d1ynua_:

• d1ynua_ first appeared in SCOP 1.73, called d1ynua1
  
• d1ynua_ appears in SCOPe 2.07