SCOPe 2.08: Domain d1ynib_: 1yni B:

Lineage for d1ynib_ (1yni B:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
   duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis

4. Superfamily d.126.1: Pentein [55909] (8 families)

5. Family d.126.1.7: Succinylarginine dihydrolase-like [143809] (2 proteins)
   Pfam PF04996

6. Protein automated matches [190835] (1 species)
   not a true protein

7. Species Escherichia coli [TaxId:562] [188143] (3 PDB entries)

8. Domain d1ynib_: 1yni B: [123734]
   Other proteins in same PDB: d1ynia1
   automated match to d1ynfa1
   complexed with k, sug

Details for d1ynib_

PDB Entry: 1yni, 2.2 Å

PDB Description: crystal structure of n-succinylarginine dihydrolase, astb, bound to substrate and product, an enzyme from the arginine catabolic pathway of escherichia coli

PDB Compounds: (B:) Succinylarginine Dihydrolase

SCOPe Domain Sequences for d1ynib_:

Sequence; same for both SEQRES and ATOM records:

>d1ynib_ d.126.1.7 (B:) automated matches {Escherichia coli [TaxId: 562]}
nawevnfdglvglthhyaglsfgneastrhrfqvsnprlaakqgllkmkaladagfpqav
ippherpfipvlrqlgfsgsdeqvlekvarqaphwlssvssaspmwvanaatiapsadtl
dgkvhltvanlnnkfhrsleapvtesllkaifndeekfsvhsalpqvallgdegaanhnr
lgghygepgmqlfvygreegndtrpsryparqtreaseavarlnqvnpqqvifaqqnpdv
idqgvfhndviavsnrqvlfchqqafarqsqllanlrarvngfmaievpatqvsvsdtvs
tylfnsqllsrddgsmmlvlpqecrehagvwgylnellaadnpiselkvfdlresmangg
gpaslrlrvvlteeerravnpavmmndtlfnalndwvdryyrdrltaadladpqllregr
ealdvlsqllnlgsvypfqr

Timeline for d1ynib_:

• d1ynib_ first appeared in SCOP 1.73, called d1ynib1
  
• d1ynib_ appears in SCOPe 2.07