SCOPe 2.01: Domain d1ynff_: 1ynf F:

Lineage for d1ynff_ (1ynf F:)

1. Root: SCOPe 2.01

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
   duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis

4. Superfamily d.126.1: Pentein [55909] (8 families)

5. Family d.126.1.7: Succinylarginine dihydrolase-like [143809] (2 proteins)
   Pfam PF04996

6. Protein automated matches [190835] (1 species)
   not a true protein

7. Species Escherichia coli [TaxId:562] [188143] (3 PDB entries)

8. Domain d1ynff_: 1ynf F: [123728]
   Other proteins in same PDB: d1ynfa1
   automated match to d1ynfa1
   complexed with k

Details for d1ynff_

PDB Entry: 1ynf, 1.9 Å

PDB Description: Crystal Structure of N-Succinylarginine Dihydrolase, AstB, bound to Substrate and Product, an Enzyme from the Arginine Catabolic Pathway of Escherichia coli

PDB Compounds: (F:) Succinylarginine Dihydrolase

SCOPe Domain Sequences for d1ynff_:

Sequence, based on SEQRES records:

>d1ynff_ d.126.1.7 (F:) automated matches {Escherichia coli [TaxId: 562]}
nawevnfdglvglthhyaglsfgneastrhrfqvsnprlaakqgllkmkaladagfpqav
ippherpfipvlrqlgfsgsdeqvlekvarqaphwlssvssaspmwvanaatiapsadtl
dgkvhltvanlnnkfhrsleapvtesllkaifndeekfsvhsalpqvallgdegaanhnr
lgghygepgmqlfvygreegndtrpsryparqtreaseavarlnqvnpqqvifaqqnpdv
idqgvfhndviavsnrqvlfchqqafarqsqllanlrarvngfmaievpatqvsvsdtvs
tylfnsqllsrddgsmmlvlpqecrehagvwgylnellaadnpiselkvfdlresmangg
gpaclrlrvvlteeerravnpavmmndtlfnalndwvdryyrdrltaadladpqllregr
ealdvlsqllnlgsvypfqr

Sequence, based on observed residues (ATOM records):

>d1ynff_ d.126.1.7 (F:) automated matches {Escherichia coli [TaxId: 562]}
nawevnfdglvglthhyahrfqvsnprlaakqgllkmkaladagfpqavippherpfipv
lrqlgfsgsdeqvlekvarqaphwlssvssaspmwvanaatiapsadtldgkvhltvanl
nnkfhrsleapvtesllkaifndeekfsvhsalpqvallgdegaanhnrlgghygepgmq
lfvygreegndtrpsryparqtreaseavarlnqvnpqqvifaqqnpdvidqgvfhndvi
avsnrqvlfchqqafarqsqllanlrarvngfmaievpatqvsvsdtvstylfnsqllsr
ddgsmmlvlpqecrehagvwgylnellaadnpiselkvfdlresmangggpaclrlrvvl
teeerravnpavmmndtlfnalndwvdryyrdrltaadladpqllregrealdvlsqlln
lgsvypfqr

Timeline for d1ynff_:

• d1ynff_ first appeared in SCOP 1.73, called d1ynff1
  
• d1ynff_ was called d1ynff1 in SCOP 1.75
  
• d1ynff_ appears in SCOPe 2.02
  
• d1ynff_ appears in the current release, SCOPe 2.08