SCOP 1.75: Domain d1ynfd1: 1ynf D:2-441

Lineage for d1ynfd1 (1ynf D:2-441)

1. Root: SCOP 1.75

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
   duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis

4. Superfamily d.126.1: Pentein [55909] (7 families)

5. Family d.126.1.7: Succinylarginine dihydrolase-like [143809] (1 protein)
   Pfam PF04996

6. Protein Succinylarginine dihydrolase [143810] (1 species)

7. Species Escherichia coli [TaxId:562] [143811] (3 PDB entries)
   Uniprot P76216 2-441

8. Domain d1ynfd1: 1ynf D:2-441 [123726]
   automatically matched to 1YNF A:2-441
   complexed with k

Details for d1ynfd1

PDB Entry: 1ynf, 1.9 Å

PDB Description: Crystal Structure of N-Succinylarginine Dihydrolase, AstB, bound to Substrate and Product, an Enzyme from the Arginine Catabolic Pathway of Escherichia coli

PDB Compounds: (D:) Succinylarginine Dihydrolase

SCOP Domain Sequences for d1ynfd1:

Sequence, based on SEQRES records:

>d1ynfd1 d.126.1.7 (D:2-441) Succinylarginine dihydrolase {Escherichia coli [TaxId: 562]}
nawevnfdglvglthhyaglsfgneastrhrfqvsnprlaakqgllkmkaladagfpqav
ippherpfipvlrqlgfsgsdeqvlekvarqaphwlssvssaspmwvanaatiapsadtl
dgkvhltvanlnnkfhrsleapvtesllkaifndeekfsvhsalpqvallgdegaanhnr
lgghygepgmqlfvygreegndtrpsryparqtreaseavarlnqvnpqqvifaqqnpdv
idqgvfhndviavsnrqvlfchqqafarqsqllanlrarvngfmaievpatqvsvsdtvs
tylfnsqllsrddgsmmlvlpqecrehagvwgylnellaadnpiselkvfdlresmangg
gpaclrlrvvlteeerravnpavmmndtlfnalndwvdryyrdrltaadladpqllregr
ealdvlsqllnlgsvypfqr

Sequence, based on observed residues (ATOM records):

>d1ynfd1 d.126.1.7 (D:2-441) Succinylarginine dihydrolase {Escherichia coli [TaxId: 562]}
nawevnfdglvglthhyahrfqvsnprlaakqgllkmkaladagfpqavippherpfipv
lrqlgfsgsdeqvlekvarqaphwlssvssaspmwvanaatiapsadtldgkvhltvanl
nnkfhrsleapvtesllkaifndeekfsvhsalpqvallgdegaanhnrlgghygepgmq
lfvygreegndtrpsryparqtreaseavarlnqvnpqqvifaqqnpdvidqgvfhndvi
avsnrqvlfchqqafarqsqllanlrarvngfmaievpatqvsvsdtvstylfnsqllsr
ddgsmmlvlpqecrehagvwgylnellaadnpiselkvfdlresmangggpaclrlrvvl
teeerravnpavmmndtlfnalndwvdryyrdrltaadladpqllregrealdvlsqlln
lgsvypfqr

Timeline for d1ynfd1:

• d1ynfd1 first appeared in SCOP 1.73
  
• d1ynfd1 is called d1ynfd_ in SCOPe 2.01
  
• d1ynfd1 appears in the current release, SCOPe 2.08, called d1ynfd_