SCOPe 2.08: Domain d1ymmb2: 1ymm B:3-92

Lineage for d1ymmb2 (1ymm B:3-92)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
   dimeric

4. Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families)

5. Family d.19.1.1: MHC antigen-recognition domain [54453] (13 proteins)

6. Protein Class II MHC beta chain, N-terminal domain [88819] (15 species)

7. Species Human (Homo sapiens), HLA-DR2 [TaxId:9606] [88822] (13 PDB entries)
   Uniprot P04229 30-219

8. Domain d1ymmb2: 1ymm B:3-92 [123704]
   Other proteins in same PDB: d1ymma1, d1ymma2, d1ymmb1, d1ymmd1, d1ymme1, d1ymme2
   automatically matched to d1bx2b2
   complexed with nag
   fragment; missing more than one-third of the common structure and/or sequence

Details for d1ymmb2

PDB Entry: 1ymm, 3.5 Å

PDB Description: tcr/hla-dr2b/mbp-peptide complex

PDB Compounds: (B:) HLA class II histocompatibility antigen, DR beta chain

SCOPe Domain Sequences for d1ymmb2:

Sequence; same for both SEQRES and ATOM records:

>d1ymmb2 d.19.1.1 (B:3-92) Class II MHC beta chain, N-terminal domain {Human (Homo sapiens), HLA-DR2 [TaxId: 9606]}
trprflwqpkrechffngtervrfldryfynqeesvrfdsdvgefravtelgrpdaeywn
sqkdileqaraavdtycrhnygvvesftvq

Timeline for d1ymmb2:

• d1ymmb2 first appeared in SCOP 1.73
  
• d1ymmb2 appears in SCOPe 2.07