SCOPe 2.08: Domain d1yl3i2: 1yl3 I:58-128

Lineage for d1yl3i2 (1yl3 I:58-128)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.45: ClpS-like [54735] (1 superfamily)
   beta-alpha(2)-beta-alpha-beta; 2 layers, alpha/beta

4. Superfamily d.45.1: ClpS-like [54736] (3 families)

5. Family d.45.1.1: Ribosomal protein L7/12, C-terminal domain [54737] (1 protein)
   automatically mapped to Pfam PF00542

6. Protein Ribosomal protein L7/12, C-terminal domain [54738] (3 species)

7. Species Thermotoga maritima [TaxId:2336] [54740] (3 PDB entries)

8. Domain d1yl3i2: 1yl3 I:58-128 [123581]
   Other proteins in same PDB: d1yl301, d1yl311, d1yl321, d1yl331, d1yl351, d1yl371, d1yl381, d1yl391, d1yl3c1, d1yl3d1, d1yl3d2, d1yl3f1, d1yl3h1, d1yl3h2, d1yl3i1, d1yl3j1, d1yl3k1, d1yl3k2, d1yl3l1, d1yl3l2, d1yl3m1, d1yl3n1, d1yl3r1, d1yl3s1, d1yl3t1, d1yl3u1, d1yl3v1, d1yl3w1, d1yl3x1

Details for d1yl3i2

PDB Entry: 1yl3, 5.5 Å

PDB Description: Crystal structure of 70S ribosome with thrS operator and tRNAs. Large subunit. The coordinates for the small subunit are in the pdb entry 1YL4.

PDB Compounds: (I:) 50S ribosomal protein L7/L12

SCOPe Domain Sequences for d1yl3i2:

Sequence; same for both SEQRES and ATOM records:

>d1yl3i2 d.45.1.1 (I:58-128) Ribosomal protein L7/12, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
efdvvlksfgqnkiqvikvvreitglglkeakdlvekagspdaviksgvskeeaeeikkk
leeagaevelk

Timeline for d1yl3i2:

• d1yl3i2 first appeared in SCOP 1.73
  
• d1yl3i2 appears in SCOPe 2.07