Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily) 3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes |
Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families) division into families based on beta-sheet topologies |
Family c.37.1.14: RNA helicase [52724] (7 proteins) duplication: consists of two similar domains, one binds NTP and the other binds RNA; also contains an all-alpha subdomain in the C-terminal extension |
Protein YFV helicase, C-terminal domain [418965] (1 species) |
Species Yellow fever virus [TaxId:11089] [419427] (2 PDB entries) Uniprot P19901 |
Domain d1yksa2: 1yks A:325-623 [123562] Other proteins in same PDB: d1yksa1, d1yksa3 has additional subdomain(s) that are not in the common domain |
PDB Entry: 1yks (more details), 1.8 Å
SCOPe Domain Sequences for d1yksa2:
Sequence, based on SEQRES records: (download)
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase, C-terminal domain {Yellow fever virus [TaxId: 11089]} gtsdefphsngeiedvqtdipsepwntghdwiladkrptawflpsiraanvmaaslrkag ksvvvlnrktfereyptikqkkpdfilatdiaemganlcvervldcrtafkpvlvdegrk vaikgplrisassaaqrrgrigrnpnrdgdsyyyseptsennahhvcwleasmlldnmev rggmvaplygvegtktpvspgemrlrddqrkvfrelvrncdlpvwlswqvakaglktndr kwcfegpeeheilndsgetvkcrapggakkplrprwcdervssdqsalsefikfaegrr
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase, C-terminal domain {Yellow fever virus [TaxId: 11089]} gtsdefphsngeiedvqtdipsepwntghdwiladkrptawflpsiraanvmaaslrkag ksvvvlnrktfekkpdfilatdiaemganlcvervldcrtafkpvlvdegrkvaikgplr isassaaqrrgrigrnpnrdgdsyyyseptsennahhvcwleasmlldnmevrggmvapl ygvegtktpvspgemrlrddqrkvfrelvrncdlpvwlswqvakaglktndrkwcfegpe eheilndsgetvkcrapggakkplrprwcdervssdqsalsefikfaegrr
Timeline for d1yksa2: