SCOP 1.73: Domain d1yhcb2: 1yhc B:134-279

Lineage for d1yhcb2 (1yhc B:134-279)

1. Root: SCOP 1.73

2. Class d: Alpha and beta proteins (a+b) [53931] (334 folds)

3. Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
   core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover

4. Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (12 families)

5. Family d.14.1.7: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC [89827] (1 protein)
   duplication; there are two structural repeats of this fold; each repeat is elaborated with additional structures forming the active site

6. Protein UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC [89828] (1 species)

7. Species Aquifex aeolicus [TaxId:63363] [89829] (10 PDB entries)

8. Domain d1yhcb2: 1yhc B:134-279 [123171]
   automatically matched to d1xxea2
   complexed with cac, cl, gol, pam, so4, zn; mutant

Details for d1yhcb2

PDB Entry: 1yhc, 2.1 Å

PDB Description: crystal structure of aquifex aeolicus lpxc deacetylase complexed with cacodylate

PDB Compounds: (B:) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase

SCOP Domain Sequences for d1yhcb2:

Sequence; same for both SEQRES and ATOM records:

>d1yhcb2 d.14.1.7 (B:134-279) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC {Aquifex aeolicus [TaxId: 63363]}
epiivedegrlikaepsdtlevtyegefknflgrqkftfvegneeeivlartfafdweie
hikkvglgkggslkntlvlgkdkvynpeglryenepvrhkvfdligdlyllgspvkgkfy
sfrgghslnvklvkelakkq

Timeline for d1yhcb2:

• d1yhcb2 is new in SCOP 1.73
  
• d1yhcb2 appears in SCOP 1.75
  
• d1yhcb2 appears in the current release, SCOPe 2.08