Lineage for d1yfta1 (1yft A:237-457)

  1. Root: SCOP 1.73
  2. 631650Class a: All alpha proteins [46456] (258 folds)
  3. 651002Fold a.203: Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) [101352] (1 superfamily)
    multihelical; consists of two all-alpha subdomains
  4. 651003Superfamily a.203.1: Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) [101353] (1 family) (S)
  5. 651004Family a.203.1.1: Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) [101354] (1 protein)
  6. 651005Protein Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) [101355] (1 species)
  7. 651006Species Aquifex aeolicus [TaxId:63363] [101356] (5 PDB entries)
  8. 651012Domain d1yfta1: 1yft A:237-457 [123092]
    Other proteins in same PDB: d1yfta2
    automatically matched to d1riqa1
    complexed with gly

Details for d1yfta1

PDB Entry: 1yft (more details), 2.23 Å

PDB Description: The crystal structure of the catalytic fragment of alanyl-tRNA synthetase in complex wtih glycine
PDB Compounds: (A:) Alanyl-tRNA synthetase

SCOP Domain Sequences for d1yfta1:

Sequence, based on SEQRES records: (download)

>d1yfta1 a.203.1.1 (A:237-457) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) {Aquifex aeolicus [TaxId: 63363]}
eidiifpliqfgeevsgkkygekfetdvalrviadhlraitfaisdgvipsnegrgyvir
rilrramrfgyklgienpflykgvdlvvdimkepypelelsrefvkgivkgeekrfiktl
kagmeyiqeviqkaleegrktlsgkevftaydtygfpvdlideiarekglgidlegfqce
leeqrerarkhfkveakkvkpvyshlkelgktsafvgaaal

Sequence, based on observed residues (ATOM records): (download)

>d1yfta1 a.203.1.1 (A:237-457) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) {Aquifex aeolicus [TaxId: 63363]}
eidiifpliqfgeevsgkkygekfetdvalrviadhlraitfaisdgvipsnegrgyvir
rilrramrfgyklgienpflykgvdlvvdimkepypelelsrefvkgivkgeekrfiktl
kagmeyiqeviqkaleegrktlsgkevftaydtygfpvdlideiarekglgidlegfqce
leeqrerarkhpvyshlkelgktsafvgaaal

SCOP Domain Coordinates for d1yfta1:

Click to download the PDB-style file with coordinates for d1yfta1.
(The format of our PDB-style files is described here.)

Timeline for d1yfta1:

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Domains from same chain:
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d1yfta2