Lineage for d1yfsb1 (1yfs B:237-457)

  1. Root: SCOPe 2.05
  2. 1715731Class a: All alpha proteins [46456] (286 folds)
  3. 1753106Fold a.203: Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) [101352] (1 superfamily)
    multihelical; consists of two all-alpha subdomains
  4. 1753107Superfamily a.203.1: Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) [101353] (1 family) (S)
  5. 1753108Family a.203.1.1: Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) [101354] (1 protein)
  6. 1753109Protein Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) [101355] (1 species)
  7. 1753110Species Aquifex aeolicus [TaxId:63363] [101356] (6 PDB entries)
  8. 1753112Domain d1yfsb1: 1yfs B:237-457 [123090]
    Other proteins in same PDB: d1yfsa2, d1yfsb2
    automated match to d1riqa1
    protein/RNA complex; complexed with ala

Details for d1yfsb1

PDB Entry: 1yfs (more details), 2.08 Å

PDB Description: The crystal structure of alanyl-tRNA synthetase in complex with L-alanine
PDB Compounds: (B:) Alanyl-tRNA synthetase

SCOPe Domain Sequences for d1yfsb1:

Sequence, based on SEQRES records: (download)

>d1yfsb1 a.203.1.1 (B:237-457) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) {Aquifex aeolicus [TaxId: 63363]}
eidiifpliqfgeevsgkkygekfetdvalrviadhlraitfaisdgvipsnegrgyvir
rilrramrfgyklgienpflykgvdlvvdimkepypelelsrefvkgivkgeekrfiktl
kagmeyiqeviqkaleegrktlsgkevftaydtygfpvdlideiarekglgidlegfqce
leeqrerarkhfkveakkvkpvyshlkelgktsafvgaaal

Sequence, based on observed residues (ATOM records): (download)

>d1yfsb1 a.203.1.1 (B:237-457) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) {Aquifex aeolicus [TaxId: 63363]}
eidiifpliqfgeevsgkkygekfetdvalrviadhlraitfaisdgvipsnegrgyvir
rilrramrfgyklgienpflykgvdlvvdimkepypelelsrefvkgivkgeekrfiktl
kagmeyiqeviqkaleegrktlsgkevftaydtygfpvdlideiarekglgidlegfqce
leeqrerarkhpvyshlkelgktsafvgaaal

SCOPe Domain Coordinates for d1yfsb1:

Click to download the PDB-style file with coordinates for d1yfsb1.
(The format of our PDB-style files is described here.)

Timeline for d1yfsb1:

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Domains from same chain:
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d1yfsb2