SCOP 1.73: Domain d1yf3a1: 1yf3 A:1-259

Lineage for d1yf3a1 (1yf3 A:1-259)

1. Root: SCOP 1.73

2. Class c: Alpha and beta proteins (a/b) [51349] (141 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (52 families)

5. Family c.66.1.28: N6 adenine-specific DNA methylase, DAM [88788] (2 proteins)

6. Protein DNA methylase T4DAM [102584] (1 species)

7. Species Bacteriophage T4 [TaxId:10665] [102585] (5 PDB entries)

8. Domain d1yf3a1: 1yf3 A:1-259 [123046]
   complexed with gol, sah

Details for d1yf3a1

PDB Entry: 1yf3, 2.29 Å

PDB Description: t4dam in complex with adohcy and 13-mer oligonucleotide making non- and semi-specific (~1/4) contact

PDB Compounds: (A:) DNA adenine methylase

SCOP Domain Sequences for d1yf3a1:

Sequence; same for both SEQRES and ATOM records:

>d1yf3a1 c.66.1.28 (A:1-259) DNA methylase T4DAM {Bacteriophage T4 [TaxId: 10665]}
mlgaiaytgnkqsllpelkshfpkynrfvdlfcgglsvslnvngpvlandiqepiiemyk
rlinvswddvlkvikqyklsktskeeflklredynktrdplllyvlhfhgfsnmirinyk
gnfttpfgkrtinknsekrfnhfkqncdkiifsslhfkdvkildgdfvyvdppylitvad
ynkfwsedeekdllnlldslndrgikfglsnvlehhgkentllkewskkynvkhlnkkyv
fniyhskekngtdevyifn

Timeline for d1yf3a1:

• d1yf3a1 is new in SCOP 1.73
  
• d1yf3a1 appears in SCOP 1.75
  
• d1yf3a1 appears in the current release, SCOPe 2.08