Lineage for d1yd9a1 (1yd9 A:6-193)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2120592Fold c.50: Macro domain-like [52948] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 6 strands, order 165243, strand 3 is antiparallel to the rest
  4. 2120593Superfamily c.50.1: Macro domain-like [52949] (4 families) (S)
  5. 2120618Family c.50.1.2: Macro domain [89724] (7 protein domains)
    found in different proteins, including macro-H2a histone and the Appr-1"-p processing enzyme
  6. 2120619Protein Histone macro-H2a1.1 [142547] (2 species)
  7. 2120637Species Norway rat (Rattus norvegicus) [TaxId:10116] [142548] (1 PDB entry)
    Uniprot Q02874 180-370
  8. 2120638Domain d1yd9a1: 1yd9 A:6-193 [122976]
    Other proteins in same PDB: d1yd9b_, d1yd9c2, d1yd9c3, d1yd9d_
    Isoform 1
    complexed with au

Details for d1yd9a1

PDB Entry: 1yd9 (more details), 1.6 Å

PDB Description: 1.6A Crystal Structure of the Non-Histone Domain of the Histone Variant MacroH2A1.1.
PDB Compounds: (A:) Core histone macro-H2A.1

SCOPe Domain Sequences for d1yd9a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yd9a1 c.50.1.2 (A:6-193) Histone macro-H2a1.1 {Norway rat (Rattus norvegicus) [TaxId: 10116]}

SCOPe Domain Coordinates for d1yd9a1:

Click to download the PDB-style file with coordinates for d1yd9a1.
(The format of our PDB-style files is described here.)

Timeline for d1yd9a1: