Lineage for d1yd8v1 (1yd8 V:1-73)

  1. Root: SCOP 1.73
  2. 713694Class d: Alpha and beta proteins (a+b) [53931] (334 folds)
  3. 717080Fold d.15: beta-Grasp (ubiquitin-like) [54235] (13 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 717081Superfamily d.15.1: Ubiquitin-like [54236] (7 families) (S)
  5. 717082Family d.15.1.1: Ubiquitin-related [54237] (38 proteins)
    Pfam PF00240
  6. 717214Protein Ubiquitin [54238] (3 species)
  7. 717220Species Human (Homo sapiens) [TaxId:9606] [54239] (47 PDB entries)
    identical sequence in many other species
  8. 717270Domain d1yd8v1: 1yd8 V:1-73 [122975]
    automatically matched to d1aara_

Details for d1yd8v1

PDB Entry: 1yd8 (more details), 2.8 Å

PDB Description: complex of human gga3 gat domain and ubiquitin
PDB Compounds: (V:) ubiquin

SCOP Domain Sequences for d1yd8v1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yd8v1 d.15.1.1 (V:1-73) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrl

SCOP Domain Coordinates for d1yd8v1:

Click to download the PDB-style file with coordinates for d1yd8v1.
(The format of our PDB-style files is described here.)

Timeline for d1yd8v1:

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Domains from other chains:
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d1yd8u1