Lineage for d1yd8v_ (1yd8 V:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2501112Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2501389Protein Ubiquitin [54238] (9 species)
  7. 2501413Species Cow (Bos taurus) [TaxId:9913] [224919] (38 PDB entries)
  8. 2501481Domain d1yd8v_: 1yd8 V: [122975]
    Other proteins in same PDB: d1yd8g1, d1yd8g2, d1yd8h2, d1yd8h3
    automated match to d1aara_

Details for d1yd8v_

PDB Entry: 1yd8 (more details), 2.8 Å

PDB Description: complex of human gga3 gat domain and ubiquitin
PDB Compounds: (V:) ubiquin

SCOPe Domain Sequences for d1yd8v_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yd8v_ d.15.1.1 (V:) Ubiquitin {Cow (Bos taurus) [TaxId: 9913]}

SCOPe Domain Coordinates for d1yd8v_:

Click to download the PDB-style file with coordinates for d1yd8v_.
(The format of our PDB-style files is described here.)

Timeline for d1yd8v_: