Lineage for d1yd8u_ (1yd8 U:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2931196Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2931197Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2931198Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2931514Protein Ubiquitin [54238] (9 species)
  7. 2931540Species Cow (Bos taurus) [TaxId:9913] [224919] (41 PDB entries)
  8. 2931617Domain d1yd8u_: 1yd8 U: [122974]
    Other proteins in same PDB: d1yd8g1, d1yd8g2, d1yd8h2, d1yd8h3
    automated match to d1aara_

Details for d1yd8u_

PDB Entry: 1yd8 (more details), 2.8 Å

PDB Description: complex of human gga3 gat domain and ubiquitin
PDB Compounds: (U:) ubiquin

SCOPe Domain Sequences for d1yd8u_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yd8u_ d.15.1.1 (U:) Ubiquitin {Cow (Bos taurus) [TaxId: 9913]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrl

SCOPe Domain Coordinates for d1yd8u_:

Click to download the PDB-style file with coordinates for d1yd8u_.
(The format of our PDB-style files is described here.)

Timeline for d1yd8u_: