SCOPe 2.05: Domain d1ycka1: 1yck A:9-175

Lineage for d1ycka1 (1yck A:9-175)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.118: N-acetylmuramoyl-L-alanine amidase-like [55845] (1 superfamily)
   contains mixed beta-sheet

4. Superfamily d.118.1: N-acetylmuramoyl-L-alanine amidase-like [55846] (2 families)

5. Family d.118.1.1: N-acetylmuramoyl-L-alanine amidase-like [55847] (11 proteins)
   Family 2 zinc amidase;

6. Protein Peptidoglycan recognition protein, PGRP-S [143786] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [143787] (1 PDB entry)
   Uniprot O75594 30-196

8. Domain d1ycka1: 1yck A:9-175 [122968]

Details for d1ycka1

PDB Entry: 1yck, 1.7 Å

PDB Description: Crystal structure of human peptidoglycan recognition protein (PGRP-S)

PDB Compounds: (A:) Peptidoglycan recognition protein

SCOPe Domain Sequences for d1ycka1:

Sequence; same for both SEQRES and ATOM records:

>d1ycka1 d.118.1.1 (A:9-175) Peptidoglycan recognition protein, PGRP-S {Human (Homo sapiens) [TaxId: 9606]}
cspivprnewkalasecaqhlslplryvvvshtagsscntpascqqqarnvqhyhmktlg
wcdvgynfligedglvyegrgwnftgahsghlwnpmsigisfmgnymdrvptpqairaaq
gllacgvaqgalrsnyvlkghrdvqrtlspgnqlyhliqnwphyrsp

Timeline for d1ycka1:

• d1ycka1 first appeared in SCOP 1.73
  
• d1ycka1 appears in SCOPe 2.04
  
• d1ycka1 appears in SCOPe 2.06
  
• d1ycka1 appears in the current release, SCOPe 2.08