Lineage for d1ycja1 (1ycj A:430-546,A:667-799)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2144291Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2144292Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2144293Family c.94.1.1: Phosphate binding protein-like [53851] (45 protein domains)
  6. 2144526Protein Glutamate receptor ligand binding core [53881] (5 species)
  7. 2144855Species Norway rat (Rattus norvegicus), GluR5 [TaxId:10116] [142802] (5 PDB entries)
    Uniprot P22756 429-546,667-799! Uniprot P22756 433-544,682-815
  8. 2144856Domain d1ycja1: 1ycj A:430-546,A:667-799 [122966]
    Other proteins in same PDB: d1ycja2, d1ycjb_
    complexed with glu, so4

Details for d1ycja1

PDB Entry: 1ycj (more details), 1.95 Å

PDB Description: Crystal structure of the kainate receptor GluR5 ligand-binding core in complex with (S)-glutamate
PDB Compounds: (A:) Ionotropic glutamate receptor 5

SCOPe Domain Sequences for d1ycja1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ycja1 c.94.1.1 (A:430-546,A:667-799) Glutamate receptor ligand binding core {Norway rat (Rattus norvegicus), GluR5 [TaxId: 10116]}

SCOPe Domain Coordinates for d1ycja1:

Click to download the PDB-style file with coordinates for d1ycja1.
(The format of our PDB-style files is described here.)

Timeline for d1ycja1:

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