Lineage for d1yc6o1 (1yc6 O:36-189)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 679605Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 679742Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (9 families) (S)
  5. 680064Family b.121.4.5: Bromoviridae-like VP [88639] (1 protein)
  6. 680065Protein Cucumovirus coat protein [88640] (4 species)
  7. 680066Species BMV (Brome mosaic virus) [TaxId:12302] [74886] (2 PDB entries)
  8. 680085Domain d1yc6o1: 1yc6 O:36-189 [122929]
    automatically matched to d1js9b_

Details for d1yc6o1

PDB Entry: 1yc6 (more details), 2.9 Å

PDB Description: Crystallographic Structure of the T=1 Particle of Brome Mosaic Virus
PDB Compounds: (O:) coat protein

SCOP Domain Sequences for d1yc6o1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yc6o1 b.121.4.5 (O:36-189) Cucumovirus coat protein {BMV (Brome mosaic virus) [TaxId: 12302]}
aagqgkaikaiagysiskweassdaitakatnamsitlphelsseknkelkvgrvllwlg
llpsvagrikacvaekqaqaeaafqvalavadsskevvaamytdafrgatlgdllnlqiy
lyaseavpakavvvhlevehvrptfddfftpvyr

SCOP Domain Coordinates for d1yc6o1:

Click to download the PDB-style file with coordinates for d1yc6o1.
(The format of our PDB-style files is described here.)

Timeline for d1yc6o1: