Lineage for d1yc2b1 (1yc2 B:1-252)

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 694236Fold c.31: DHS-like NAD/FAD-binding domain [52466] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456; Rossmann-like
  4. 694237Superfamily c.31.1: DHS-like NAD/FAD-binding domain [52467] (6 families) (S)
    binds cofactor molecules in the opposite direction than classical Rossmann fold
  5. 694413Family c.31.1.5: Sir2 family of transcriptional regulators [63984] (7 proteins)
    silent information regulator 2; contains insertion of a rubredoxin-like zinc finger domain
  6. 694414Protein AF0112, Sir2 homolog (Sir2-AF2) [82380] (1 species)
  7. 694415Species Archaeon Archaeoglobus fulgidus [TaxId:2234] [82381] (3 PDB entries)
  8. 694423Domain d1yc2b1: 1yc2 B:1-252 [122904]
    automatically matched to d1ma3a_
    complexed with 2pe, apr, edo, nad, nca, pg4, pge, so4, zn

Details for d1yc2b1

PDB Entry: 1yc2 (more details), 2.4 Å

PDB Description: Sir2Af2-NAD-ADPribose-nicotinamide
PDB Compounds: (B:) NAD-dependent deacetylase 2

SCOP Domain Sequences for d1yc2b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yc2b1 c.31.1.5 (B:1-252) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
medeirkaaeilakskhavvftgagisaesgiptfrgedglwrkydpeevasisgfkrnp
rafwefsmemkdklfaepnpahyaiaelermgivkavitqnidmlhqragsrrvlelhgs
mdkldcldchetydwsefvedfnkgeiprcrkcgsyyvkprvvlfgeplpqrtlfeaiee
akhcdafmvvgsslvvypaaelpyiakkagakmiivnaeptmadpifdvkiigkagevlp
kiveevkrlrse

SCOP Domain Coordinates for d1yc2b1:

Click to download the PDB-style file with coordinates for d1yc2b1.
(The format of our PDB-style files is described here.)

Timeline for d1yc2b1: