SCOP 1.75: Domain d1yauf1: 1yau F:13-233

Lineage for d1yauf1 (1yau F:13-233)

1. Root: SCOP 1.75

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (7 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.4: Proteasome subunits [56251] (3 proteins)

6. Protein Proteasome alpha subunit (non-catalytic) [56255] (5 species)
   contains an extension to the common fold at the N-terminus

7. Species Archaeon Thermoplasma acidophilum [TaxId:2303] [56256] (6 PDB entries)

8. Domain d1yauf1: 1yau F:13-233 [122856]
   Other proteins in same PDB: d1yauh1, d1yaui1, d1yauj1, d1yauk1, d1yaul1, d1yaum1, d1yaun1, d1yauo1, d1yaup1, d1yauq1, d1yaur1, d1yaus1, d1yaut1, d1yauu1
   automatically matched to d1pmaa_
   complexed with gol, so4; mutant

Details for d1yauf1

PDB Entry: 1yau, 2.4 Å

PDB Description: structure of archeabacterial 20s proteasome- pa26 complex

PDB Compounds: (F:) Proteasome alpha subunit

SCOP Domain Sequences for d1yauf1:

Sequence; same for both SEQRES and ATOM records:

>d1yauf1 d.153.1.4 (F:13-233) Proteasome alpha subunit (non-catalytic) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
tvfspdgrlfqveyareavkkgstalgmkfangvllisdkkvrsrlieqnsiekiqlidd
yvaavtsglvadarvlvdfarisaqqekvtygslvnienlvkrvadqmqqytqyggvrpy
gvslifagidqigprlfdcdpagtineykataigsgkdavvsflereykenlpekeavtl
gikalkssleegeelkapeiasitvgnkyriydqeevkkfl

Timeline for d1yauf1:

• d1yauf1 first appeared in SCOP 1.73
  
• d1yauf1 is called d1yauf_ in SCOPe 2.01
  
• d1yauf1 appears in the current release, SCOPe 2.08, called d1yauf_