Lineage for d1yaec1 (1yae C:423-544,C:669-802)

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 710610Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 710611Superfamily c.94.1: Periplasmic binding protein-like II [53850] (2 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 710612Family c.94.1.1: Phosphate binding protein-like [53851] (35 proteins)
  6. 710786Protein Glutamate receptor ligand binding core [53881] (4 species)
  7. 710919Species Rat (Rattus norvegicus), GluR6 [TaxId:10116] [142801] (6 PDB entries)
  8. 710931Domain d1yaec1: 1yae C:423-544,C:669-802 [122811]
    automatically matched to 1YAE A:421-544,A:668-804
    complexed with doq, fuc, nag

Details for d1yaec1

PDB Entry: 1yae (more details), 3.11 Å

PDB Description: structure of the kainate receptor subunit glur6 agonist binding domain complexed with domoic acid
PDB Compounds: (C:) Glutamate receptor, ionotropic kainate 2

SCOP Domain Sequences for d1yaec1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yaec1 c.94.1.1 (C:423-544,C:669-802) Glutamate receptor ligand binding core {Rat (Rattus norvegicus), GluR6 [TaxId: 10116]}

SCOP Domain Coordinates for d1yaec1:

Click to download the PDB-style file with coordinates for d1yaec1.
(The format of our PDB-style files is described here.)

Timeline for d1yaec1: