SCOPe 2.08: Domain d1y4mb_: 1y4m B:

Lineage for d1y4mb_ (1y4m B:)

1. Root: SCOPe 2.08

2. Class h: Coiled coil proteins [57942] (7 folds)

3. Fold h.3: Stalk segment of viral fusion proteins [58063] (3 superfamilies)
   core: trimeric coiled coil

4. Superfamily h.3.2: Virus ectodomain [58069] (2 families)

5. Family h.3.2.1: Virus ectodomain [58070] (9 proteins)

6. Protein HERV-FRD_6p24.1 provirus ancestral Env polyprotein [144288] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [144289] (1 PDB entry)
   Uniprot P60508 391-443

8. Domain d1y4mb_: 1y4m B: [122627]
   automated match to d1y4ma1
   complexed with cl

Details for d1y4mb_

PDB Entry: 1y4m, 1.6 Å

PDB Description: Crystal structure of human endogenous retrovirus HERV-FRD envelope protein (syncitin-2)

PDB Compounds: (B:) HERV-FRD_6p24.1 provirus ancestral Env polyprotein

SCOPe Domain Sequences for d1y4mb_:

Sequence; same for both SEQRES and ATOM records:

>d1y4mb_ h.3.2.1 (B:) HERV-FRD_6p24.1 provirus ancestral Env polyprotein {Human (Homo sapiens) [TaxId: 9606]}
nidtmakalttmqeqidslaavvlqnrrgldmltaaqggiclaldekccfwvn

Timeline for d1y4mb_:

• d1y4mb_ first appeared in SCOP 1.73, called d1y4mb1
  
• d1y4mb_ appears in SCOPe 2.07