Lineage for d1y4ma1 (1y4m A:46-98)

  1. Root: SCOPe 2.07
  2. 2643820Class h: Coiled coil proteins [57942] (7 folds)
  3. 2645404Fold h.3: Stalk segment of viral fusion proteins [58063] (3 superfamilies)
    core: trimeric coiled coil
  4. 2646635Superfamily h.3.2: Virus ectodomain [58069] (2 families) (S)
  5. 2646636Family h.3.2.1: Virus ectodomain [58070] (9 proteins)
  6. 2646651Protein HERV-FRD_6p24.1 provirus ancestral Env polyprotein [144288] (1 species)
  7. 2646652Species Human (Homo sapiens) [TaxId:9606] [144289] (1 PDB entry)
    Uniprot P60508 391-443
  8. 2646653Domain d1y4ma1: 1y4m A:46-98 [122626]
    complexed with cl

Details for d1y4ma1

PDB Entry: 1y4m (more details), 1.6 Å

PDB Description: Crystal structure of human endogenous retrovirus HERV-FRD envelope protein (syncitin-2)
PDB Compounds: (A:) HERV-FRD_6p24.1 provirus ancestral Env polyprotein

SCOPe Domain Sequences for d1y4ma1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1y4ma1 h.3.2.1 (A:46-98) HERV-FRD_6p24.1 provirus ancestral Env polyprotein {Human (Homo sapiens) [TaxId: 9606]}
nidtmakalttmqeqidslaavvlqnrrgldmltaaqggiclaldekccfwvn

SCOPe Domain Coordinates for d1y4ma1:

Click to download the PDB-style file with coordinates for d1y4ma1.
(The format of our PDB-style files is described here.)

Timeline for d1y4ma1: