SCOPe 2.08: Domain d1y3ia_: 1y3i A:

Lineage for d1y3ia_ (1y3i A:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.52: NAD kinase/diacylglycerol kinase-like [111330] (1 superfamily)
   2 domains: d1 [alpha/beta; related to the PFK N-terminal domain (53784)]; d2 [all-beta; atypical beta-sandwich made of 4 structural repeats of beta(3) unit]

4. Superfamily e.52.1: NAD kinase/diacylglycerol kinase-like [111331] (3 families)

5. Family e.52.1.1: NAD kinase-like [111332] (1 protein)
   Pfam PF01513

6. Protein Inorganic polyphosphate/ATP-NAD kinase PpnK [111333] (2 species)

7. Species Mycobacterium tuberculosis [TaxId:1773] [111335] (4 PDB entries)
   Uniprot O33196; d1:5-132; d2:140-275

8. Domain d1y3ia_: 1y3i A: [122595]
   automated match to d1u0rd_
   complexed with gol, nad, so4

Details for d1y3ia_

PDB Entry: 1y3i, 2.6 Å

PDB Description: Crystal Structure of Mycobacterium tuberculosis NAD kinase-NAD complex

PDB Compounds: (A:) Inorganic polyphosphate/ATP-NAD kinase

SCOPe Domain Sequences for d1y3ia_:

Sequence, based on SEQRES records:

>d1y3ia_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]}
vllvvhtgrdeatetarrvekvlgdnkialrvlsaeavdrgslhlapddmramgveievv
dadqhaadgcelvlvlggdgtflraaelarnasipvlgvnlgrigflaeaeaeaidavle
hvvaqdyrvedrltldvvvrqggrivnrgwalnevslekgprlgvlgvvveidgrpvsaf
gcdgvlvstptgstayafsaggpvlwpdleailvvpnnahalfgrpmvtspeatiaieie
adghdalvfcdgrremlipagsrlevtrcvtsvkwarldsapftdrlvrkfrlpvt

Sequence, based on observed residues (ATOM records):

>d1y3ia_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]}
vllvvhlvlvlggdgtflraaelarnasipvlgvnlgrigflaeaeaeaidavlehvvaq
dyrvedrltldvvvrqggrivnrgwalnevslekgprlgvlgvvveidgrpvsafgcdgv
lvstptgstayafsaggpvlwpdleailvvpnnahalfgrpmvtspeatiaieieadghd
alvfcdgrremlipagsrlevtrcvtsvkwarldsapftdrlvrkfrlpvt

Timeline for d1y3ia_:

• d1y3ia_ first appeared in SCOP 1.73, called d1y3ia1
  
• d1y3ia_ appears in SCOPe 2.07