SCOPe 2.08: Domain d1y3de2: 1y3d E:1-275

Lineage for d1y3de2 (1y3d E:1-275)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.41: Subtilisin-like [52742] (1 superfamily)
   3 layers: a/b/a, parallel beta-sheet of 7 strands, order 2314567; left-handed crossover connection between strands 2 & 3

4. Superfamily c.41.1: Subtilisin-like [52743] (3 families)

5. Family c.41.1.1: Subtilases [52744] (15 proteins)

6. Protein Subtilisin [52745] (7 species)

7. Species Bacillus amyloliquefaciens, Novo/BPN' [TaxId:1390] [52751] (56 PDB entries)
   Uniprot P00782 108-382

8. Domain d1y3de2: 1y3d E:1-275 [122592]
   Other proteins in same PDB: d1y3de3, d1y3di1
   automated match to d1to2e_
   complexed with 15p, ca, cit, na; mutant

Details for d1y3de2

PDB Entry: 1y3d, 1.8 Å

PDB Description: crystal structure of the complex of subtilisin bpn' with chymotrypsin inhibitor 2 r67a mutant

PDB Compounds: (E:) subtilisin bpn'

SCOPe Domain Sequences for d1y3de2:

Sequence; same for both SEQRES and ATOM records:

>d1y3de2 c.41.1.1 (E:1-275) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]}
aqsvpygvsqikapalhsqgytgsnvkvavidsgidsshpdlkvaggasmvpsetnpfqd
nnshgthvagtvaalnnsigvlgvapsaslyavkvlgadgsgqyswiingiewaiannmd
vinmslggpsgsaalkaavdkavasgvvvvaaagnegtsgssstvgypgkypsviavgav
dssnqrasfssvgpeldvmapgvsiqstlpgnkygayngtsmasphvagaaalilskhpn
wtntqvrsslentttklgdsfyygkglinvqaaaq

Timeline for d1y3de2:

• d1y3de2 first appeared in SCOP 1.73, called d1y3de1
  
• d1y3de2 appears in SCOPe 2.07