Lineage for d1y1ma_ (1y1m A:)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2520986Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2520987Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2520988Family c.94.1.1: Phosphate binding protein-like [53851] (45 proteins)
  6. 2521755Protein N-methyl-D-aspartate receptor subunit 1 [89787] (3 species)
  7. 2521767Species Norway rat (Rattus norvegicus) [TaxId:10116] [89788] (33 PDB entries)
  8. 2521776Domain d1y1ma_: 1y1m A: [122548]
    automated match to d1pb7a_
    complexed with ac5

Details for d1y1ma_

PDB Entry: 1y1m (more details), 1.8 Å

PDB Description: crystal structure of the nr1 ligand binding core in complex with cycloleucine
PDB Compounds: (A:) Glutamate [NMDA] receptor subunit zeta 1

SCOPe Domain Sequences for d1y1ma_:

Sequence, based on SEQRES records: (download)

>d1y1ma_ c.94.1.1 (A:) N-methyl-D-aspartate receptor subunit 1 {Norway rat (Rattus norvegicus) [TaxId: 10116]}

Sequence, based on observed residues (ATOM records): (download)

>d1y1ma_ c.94.1.1 (A:) N-methyl-D-aspartate receptor subunit 1 {Norway rat (Rattus norvegicus) [TaxId: 10116]}

SCOPe Domain Coordinates for d1y1ma_:

Click to download the PDB-style file with coordinates for d1y1ma_.
(The format of our PDB-style files is described here.)

Timeline for d1y1ma_: