SCOPe 2.06: Domain d1wytc_: 1wyt C:

Lineage for d1wytc_ (1wyt C:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.7: Glycine dehydrogenase subunits (GDC-P) [142678] (2 proteins)
   Pfam PF02347

6. Protein Glycine dehydrogenase (decarboxylating) subunit 1 [142679] (1 species)

7. Species Thermus thermophilus [TaxId:274] [142680] (3 PDB entries)
   Uniprot Q5SKW8 1-437

8. Domain d1wytc_: 1wyt C: [121450]
   Other proteins in same PDB: d1wytb1, d1wytd_
   automated match to d1wyta1

Details for d1wytc_

PDB Entry: 1wyt, 2.4 Å

PDB Description: Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in apo form

PDB Compounds: (C:) glycine dehydrogenase (decarboxylating) subunit 1

SCOPe Domain Sequences for d1wytc_:

Sequence; same for both SEQRES and ATOM records:

>d1wytc_ c.67.1.7 (C:) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}
mdytphteeeiremlrrvgaasledlfahlpkeilsppidlpeplpewkvleelrrlaaq
nlpahkaflgggvrshhvppvvqalaargefltaytpyqpevsqgvlqatfeyqtmiael
agleianasmydgatalaegvllalretgrmgvlvsqgvhpeyravlrayleavgakllt
lpleggrtplpevgeevgavvvqnpnflgaledlgpfaeaahgagalfvavadplslgvl
kppgaygadiavgdgqslglpmgfggphfgflatkkafvrqlpgrlvsetvdvegrrgfi
ltlqareqyirrakaksnittnaqltalmgamylaalgpeglrevalksvemahklhall
levpgvrpftpkpffnefalalpkdpeavrralaergfhgatpvpreygenlalfaatel
heeedllalrealkevl

Timeline for d1wytc_:

• d1wytc_ first appeared in SCOP 1.73, called d1wytc1
  
• d1wytc_ appears in SCOPe 2.05
  
• d1wytc_ appears in SCOPe 2.07
  
• d1wytc_ appears in the current release, SCOPe 2.08