SCOPe 2.08: Domain d1ww1b_: 1ww1 B:

Lineage for d1ww1b_ (1ww1 B:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.157: Metallo-hydrolase/oxidoreductase [56280] (1 superfamily)
   duplication of beta(4)-alpha-beta-alpha motif; 4 layers a/b/b/a; mixed beta-sheets

4. Superfamily d.157.1: Metallo-hydrolase/oxidoreductase [56281] (16 families)

5. Family d.157.1.7: RNase Z-like [143916] (1 protein)
   part of Pfam PF00753; tRNA 3'-endonuclease; elaborated with additional structures and insert alpha(2)-beta(2) subdomain

6. Protein Ribonuclease Z (RNase Z) [143917] (3 species)

7. Species Thermotoga maritima [TaxId:2336] [143920] (2 PDB entries)
   Uniprot Q9WZW8 1-280

8. Domain d1ww1b_: 1ww1 B: [121349]
   automated match to d1ww1a1
   complexed with zn

Details for d1ww1b_

PDB Entry: 1ww1, 2.6 Å

PDB Description: Crystal structure of tRNase Z from Thermotoga maritima

PDB Compounds: (B:) tRNase Z

SCOPe Domain Sequences for d1ww1b_:

Sequence, based on SEQRES records:

>d1ww1b_ d.157.1.7 (B:) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]}
mniigfskalfstwiyysperilfdagegvsttlgskvyafkyvflthghvdhiaglwgv
vnirnngmgdrekpldvfypegnraveeytefikranpdlrfsfnvhplkegervflrna
ggfkryvqpfrtkhvssevsfgyhifevrrklkkefqgldskeisrlvkekgrdfvteey
hkkvltisgdslaldpeeirgtellihectfldardrryknhaaidevmesvkaagvkkv
ilyhistryirqlksvikkyreempdveilymdprkvfem

Sequence, based on observed residues (ATOM records):

>d1ww1b_ d.157.1.7 (B:) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]}
mniigfskalfstwiyysperilfdagegvsttlgskvyafkyvflthghvdhiaglwgv
vnirnngmgdrekpldvfypegnraveeytefikranpdlrfsfnvhplkegervflrna
ggfkryvqpfrtvsfgyhifevrrkvteeyhkkvltisgdslaldpeeirgtellihect
aaidevmesvkaagvkkvilyhistryirqlksvikkyreempdveilymdprkvfem

Timeline for d1ww1b_:

• d1ww1b_ first appeared in SCOP 1.73, called d1ww1b1
  
• d1ww1b_ appears in SCOPe 2.07